Here are images of the areas of the USS Athena saucer and the atrium (as briefly seen in #StarfleetAcademy's "Rubincon) that are normally connected to each other seen up close, so you can see some of the openings of the actual atrium and turbolift shafts.
@gaghyogi49 I was so confused during the season finale because I thought the atrium was all in the saucer because of the delta-shaped skylight... so this clears it up nicely