Caspar van LissaFeb 23
Does your R-script work on your computer? Want to make it fully reproducible on ANY system, now and in the future? In this video, I demonstrate how to turn R scripts into reproducible, version-controlled projects with worcs, renv, targets, and testthat to verify reproducibility. https://youtu.be/3mgRFMr5APU
Make Existing R Code Reproducible with 'worcs' and 'targets'

YouTube
Show threadRok
@cjvanlissa Really nice demo! I love the argument of "work reproducibly to be kind to your future self"!! We created the Renku platform to address some of these problems - specifically to package all of the project resources together in a way to make them one-click (re)usable. Feel free to try it out: https://renkulab.io - in the next release we are adding support for building images with renv dependencies which would map really well to the workflow you present in the video!
Reproducible Data Science | Open Research | Renku

Work together on data science projects reproducibly. Share code, data and computational environments whilst accessing free computing resources.

Feb 23 at 4:56pmWeb
Show threadCaspar van LissaFeb 25
@rrrrrok excellent! My dream is that the European Open Science Cloud or similar party will adopt a platform like yours, and let universities issue certificates to verify repo's reproducibility. We also have a grant to pilot a similar system in NL, maybe we should talk!
Show threadRokFeb 25
@cjvanlissa yes definitely! We are taking part in EOSC and hoping to spread some of these ideas there. I'd be very happy to chat anytime about possible collaboration!