I want to rescue this from my account on the birdsite but I once got into arguing with TERFs (it happens, try not to judge me too harshly) and as a biologist I just wanted to push back a little on the "it's just biology" line, so I wrote the following:

Okay, sex determination in humans.

This shit is COMPLICATED and this will probably be a longish thread. Sorry. But I've seen a lot of people claim that "biology says" that everyone is either male or female, full stop, and it's just not true. 1/22

So human fertilized eggs develop into embryos with a pair of "indeterminate gonads" and TWO full sets of tubes. The Wolffian ducts can develop into the epididymis (omg spelled FROM MEMORY) & vas deferens, and the Müllerian ducts can develop into uterus and fallopian tubes. 2/22
Most embryos that get a Y chromosome will have a working copy of a gene called SRY (for Sex-determining Region on the Y). The product of the SRY gene is a protein that can control when other genes are turned on. If the cells of a gonad start making working SRY protein … 3/22
… then they start to develop into a testis. Some of those cells produce high levels of testosterone, and some make a protein called Müllerian-Inhibiting Substance. The Wolffian ducts need high testosterone to survive and develop; Müllerian ducts do by default UNLESS … 4/22

… MIS is around to stop them. So SRY can coordinate a program that shunts the default female development into male development.

Chromosomes can break and pieces can rearrange, so some people get a Y chromosome without an SRY gene, and are usually seen as female at birth. 5/22

Humans didn't evolve to have Y chromosomes in the females, or only 1 X, so these people generally have abnormal sexual development and tend not to be fertile. Likewise, the rearrangement can mean that SRY winds up on another chromosome, so someone can be XX and "male." 6/22

Without some other genes on the Y chromosome, and with 2 Xs, these people do not exactly develop the "normal" male program.

But it's a LOT more complicated that that, even. 7/22

I was careful to say "a working copy" of SRY above, because genes mutate sometimes. A change of a single DNA "letter" (out of >800) can make a completely broken protein that's like not having an SRY gene at all. OR, it can make a partially changed protein. 8/22
SRY controls a lot of things, so a partial change in the protein can mean activation of some crazy subset of the genetic program it normally activates. The result is an embryo not really developing as male, exactly, or as female, exactly. 9/22
Consider, too, that the enzymes that make testosterone are made from genes (controlled by SRY) different from the gene for MIS. One of those and not the other can be broken, and you can develop with unusual combinations of Wollfian/Müllerian duct products. 10/22
And just like SRY, the enzymes that make testosterone can be partially changed, and you can make intermediate levels, that don't exactly direct male development but don't exactly direct female development either. 11/22
For other parts of the body to become "male" or "female," they have to respond to these signals. That early embryo has tissues that can either become a penis and scrotum or a clitoris and labia. Mostly the difference is in how much testosterone they see. 12/22
But responding to it requires another protein that controls other genes, this one called the Androgen Receptor. People with AR mutations can be XY with a working SRY gene, but will generally be viewed as female because their cells don't know that testosterone is high. 13/22
At puberty, lots of other cells become responsive to these signals. Breasts and beards may develop. When different cells in an animal all turn on a gene, it's often the case that different DNA sequences near that gene control that process in different cells. 14/22
(These sequences, called "enhancers" and "silencers," are what I actually work on myself.) Just like the parts of genes that make proteins, these can be different between people, so the subprograms that make up the broader genetic program of sex can differ. 15/22

Most complex and controversial of all of this, it is *likely* the case that part of this program happens in the brain.

No one really knows what "masculinization" or "feminization" of a human brain means! (Though very smart people are earnestly trying to figure it out.) 16/22

In other animals, with simpler and more hard-wired brains, we have learned a lot. In fruit flies, for example, we know that there are separate (though obviously linked) genetic programs to determine sex in the body and in the brain. 17/22

So mutations exist that produce anatomically male flies with female behaviors, or vice versa.

People are VASTLY more complex than flies and our brains are much more flexible. It's not clear, after decades of looking, that male and female brains are genuinely different. 18/22

Still, most male people become sexually attracted to female features at puberty, and vice versa. This is *suggestive* (though by no means proof) that some kind of "male program" and "female program" for brain development might be encoded in the genes. 19/22
And of course these are then under the control of still other DNA sequences. It's really not hard to imagine a situation where "the body" develops as male and "the brain" as female, or vice versa. Or where parts of one program and parts of another overlap. 20/22
@stevegis_ssg I'm really intrigued by the brain-sex thing. I was raised in a culture that strongly discouraged gendered expectations - I was told I was a person and my male body was not much more significant than my hair colour or whatever. I was aware of gendered expectations in larger society, but told that was sexism and sneered at so was somewhat "inoculated" against internalising it. In modern parlance, I am agender.
@stevegis_ssg When I went through my "OK I'm trans but maybe I don't need to transition" struggle phase, I tried (in vain) via introspection to find a “reason” so I could counter it. It feels very much instinctual, like sexual attraction; there's no “why”. Introspection is unreliable, but it's always felt to me like “girls and women are my peers; that is the group I’m in: I should be like them.” I can't tease the feelings apart more than that. It's been the same since I was 4 years old.
@stevegis_ssg Speaking as a fly, I object STRONGLY to your flyism. We too are vastly complex!
@stevegis_ssg Yes, there is a model called "four core genotypes" in mice where the gonadal sex is not correlated with the genetic sex (XX with testes and XY with ovaries) to study whether behaviors are dicted by the sex chromosomes or the gonadal hormones. However, to make XY females we mutate Sry, but we know Sry is also expressed in the brain. As such the model is imperfect. People currently work on a better model 👌
@stevegis_ssg i haven't looked into the research for a while, but there's a temptation to talk about the female path as the default one, but there's also a bunch of actors that need to be present and unmutated for that path to complete within "normal" parameters. FOXP2 rings a bell but it's been a hot minute since I studied it
@tessiselated
Ooh, I study the FOX genes! (I'm supposed to be writing a ms.) We even have a grant proposal (not funded in this round) to work on FOXPs!
@stevegis_ssg one of my uni lecturers did a lot of work on the FOXPs but this is like... 15 years ago now and I've been out of the biochem/academic space for a while
@stevegis_ssg Thank you for the thread... was close explaining this to kiddo after he had some questions from the puberty classes we're taking but I missed some of the details.
@stevegis_ssg Koopman published on this in 1990. How is it people are still arguing sex is binary? https://pubmed.ncbi.nlm.nih.gov/2247150/
Expression of a candidate sex-determining gene during mouse testis differentiation - PubMed

The development of a eutherian mammal as a male is a consequence of testis formation in the embryo, which is thought to be initiated by a gene on the Y chromosome. In the absence of this gene, ovaries are formed and female characteristics develop. Sex determination therefore hinges on the action of …

PubMed
@stevegis_ssg there is about 0.0125% (I think, I might have missed a zero) who under the current biological defininion of Human, aren't...
@stevegis_ssg really interesting! Thank you for taking the time to post it.
@stevegis_ssg this is really interesting. Related, I’ve kept this image as a reference for a long time to basically explain the same things
@hugh @stevegis_ssg This graphic was published in Scientific American, Sep 1 2017 and was created by Pitch Interactive and Amanda Montañez.

@stevegis_ssg biology is weird and squishy. There is also the strange case of chimerism, women who are the biological aunts and not mothers of their own children:

https://embryo.asu.edu/pages/case-lydia-fairchild-and-her-chimerism-2002

The Case of Lydia Fairchild and Her Chimerism (2002) | Embryo Project Encyclopedia

In 2002, after applying for government assistance in the state of Washington, Lydia Fairchild was told that her two children were not a genetic match with her and that therefore, biologically, she could not be their mother. Researchers later determined that the genetic mismatch was due to chimerism, a condition in which two genetically distinct cell lines are present in one body. The state accused Fairchild of fraud and filed a lawsuit against her. Following evidence from another case of chimerism documented in The New England Journal of Medicine in a woman named Karen Keegan, Fairchild was able to secure legal counsel and establish evidence of her biological maternity. A cervical swab eventually revealed Fairchild’s second distinct cell line, showing that she had not genetically matched her children because she was a chimera. Fairchild’s case was one of the first public accounts of chimerism and has been used as an example in subsequent discussions about the validity and reliability of DNA evidence in legal proceedings within the United States.

@stevegis_ssg waking up to info dumps on mastodon is a wonderful reoccurrence in my life

@stevegis_ssg , I'm always grateful for any critical feedback from people working in this field (such as your good self) about a 2008 essay I wrote on this very topic, "Kudzu and the California Marriage Amendment" (http://linuxmafia.com/faq/Essays/marriage.html), that ended up being one of the most popular pieces I've ever written. All corrections are promptly implemented and acknowledged in the footnotes (only one so far; see footnote 3).

I wrote it as an exercise in "non-rhetoric rhetoric" inspired by one of my favourite authors, John McPhee, who uses that mode of expression to great effect, notably in his superb collection of New Yorker essays The Control of Nature. My target was California Proposition 8, "California Marriage Protection Act", but rather than argue against it in the usual unimaginative (and fruitless) fashion, I tried saying "Suppose you got what you say you want. Would you actually like it?" It turns out, proponents would have been aghast at what they proposed to hammer into the state constitution, as biology would have sabotaged their overly simplistic hopes.

However, my predictions were never put to the test, as the proposition, albeit passed, was swiftly overturned, and the movement behind it became, for now, a dead letter. (As I mention in the essay, those predictions were validated elsewhere.)

@unixmercenary @stevegis_ssg I still have that essay in my bookmarks!
@stevegis_ssg @marcrr Yes! Totally, it's very complicated! I add that only 40% of the patients presenting a difference in sex development (DSD) are found with mutations in the known sex determination factors It is clear we still don't understand well the process. Understanding it is partly my job by studying gene regulation in the mouse model 💪

@IsabelleStevant @marcrr

Thank you for your work! This isn't even my field; I just do ultrabasic work on transcriptional regulation, mostly in fruit fly muscle and heart development.

@stevegis_ssg @marcrr I know who you are, you sent me a CD2 reporter plasmid for drosophila few year ago 😉
@stevegis_ssg I appreciate your willingness to try to educate those who refuse to be educated.
@stevegis_ssg Bookmarked! Thank you for this! 🙏🤘😊

@stevegis_ssg thank you for this thread!

…I can’t be the first person to want to make a SRY not SRY joke, can I?

@stevegis_ssg this got necroboosted to my feed (presumably ukpol related today) and I don't know if I saw it the first time around, but it's very good! I am in another corner of biology over here and I understand this better after reading and have more terms to wikipedia and pubmed if I want. Thanks!
@iris
I confess that I brought it back myself. I was furious about the UK and thought, I already explained this!
@stevegis_ssg this is the clearest explanation I've ever read ! Did you post it as a single text somewhere else? Would you mind if I did? I think this needs to be read beyond the Fediverse.

@nadege
Please feel free. Someone else collected it on their blog when I first posted it, if that's easier:

https://iamviolet.ca/2024/01/21/its-just-biology/

“It’s just biology”

A short, simple explanation of how “basic biology” can produce trans and gender diverse people.

I Am Violet
@stevegis_ssg - this is fantastic. Maybe also worth adding that a) HRT probably affects more of this than most people think, so it's still not fixed at birth, and b) even if none of this was true, it's still wouldn't be an excuse for discrimination or hate.

@stevegis_ssg
THANK YOU for this. You've articulated a very complex process in a very accessible way.

May I reprint it on my blog? I recently came out to my whole company, including providing a FAQ. This would provide another valuable reference.

@violet
Sure! And congratulations!!!
“It’s just biology”

A short, simple explanation of how “basic biology” can produce trans and gender diverse people.

I Am Violet
@violet
Very cool! Can I offer one slight correction of detail? My professional work is not actually on sex determination at all; just the fundamental mechanisms of gene regulation, which apply to that system and all others where cells have to make decisions.
@stevegis_ssg
Ok. I'll make the adjustment.
@stevegis_ssg
The regulation of gene expression by other gene sequences (and substances produced by those genes, etc.)--is that epigenetics?
@violet
Ooh, great question! I guess sort of yes? People (and any other organisms of the same species) differ at the level of the sequence of their genome, and those differences we call genetic. Epigenetics concerns modifications to the DNA and its local environment that are persistent, and often even heritable, but don't change the underlying DNA sequence. Many of the processes I study are encoded genetically, but read out epigenetically.