Major data analysis errors invalidate cancer microbiome findings https://www.biorxiv.org/content/10.1101/2023.07.28.550993v1.full #cancer #microbiome
Microbiome analyses of blood and tissues suggest cancer diagnostic approach - Nature

Microbial nucleic acids are detected in samples of tissues and blood from more than 10,000 patients with cancer, and machine learning is used to show that these can be used to discriminate between and among different types of cancer, suggesting a new microbiome-based diagnostic approach.

Nature

@moorejh And here’s a response to the recent preprint

https://github.com/gregpoore/tcga_rebuttal

GitHub - gregpoore/tcga_rebuttal: Re-analysis of data provided by Gihawi et al. 2023 bioRxiv

Re-analysis of data provided by Gihawi et al. 2023 bioRxiv - GitHub - gregpoore/tcga_rebuttal: Re-analysis of data provided by Gihawi et al. 2023 bioRxiv

GitHub