Just a summary:
1. Vajpayee had a long affair with a married woman and had a love child, which he never acknowledged in public. His son-in-law was a well-known power broker and lobbyist.
2. As a young man, he wrote rabidly communal articles, calling Indian muslims, even those who stayed behind in India after Partition as traitors and fifth columnists.
3. During the partition he wrote a series of inflammatory articles about Gandhi, targeted at incoming Punjabi refugees (such as Madanlal Pahwa)