Noam RossA neat post from Tom Palmer on managing a large R-Universe, including a bunch of `justfile` receipes : https://remlapmot.github.io/post/2026/runiverse-tips/
Noam RossDid a lil' weekend project writing a an R-DBI wrapper for Cloudflare's D1 hosted SQLite database service: noamross.r-universe.dev/RD1
👇 These cards that @[email protected]'s #R-Universe creates are awesome. Thanks @[email protected]! #RStats
RD1: DBI Client and API Wrappe...
RD1: DBI Client and API Wrappe...
RD1: DBI Client and API Wrapper for Cloudflare D1
A DBI-compliant database interface and API client for Cloudflare D1's serverless SQLite database. Provides wrappers for D1 REST API endpoints, including time travel and bookmark-based restoration, plus convenience functions for common multi-step workflows such as exporting and downloading databases.
👆 These package cards that @rOpenSci 's R-Universe creates for you are awesome. Thanks @jeroenooms!
SMTtiming may not be great given the recent re-organization at github, but browsing #Bioconductor source code and packages is going to be nicer (for now at least) when the package sources and the build system are transitioned to github - #r-universe github.com/bioconductor...
#rstats #Bioinformatics
GitHub - bioconductor-source/d...
GitHub - bioconductor-source/d...
Zhian N. Kamvar@rOpenSci an update: the bug has been fixed in the development version of {pak} and {pkgbuild}. you can down use `pak-version: "devel"` in your workflow to use it in your workflows
see https://github.com/hubverse-org/hubValidations/issues/235#issuecomment-2863055858
GitHub Actions setup-r-dependencies@v2 step failing to install hubValidations with malformed DESCRIPTION error · Issue #235 · hubverse-org/hubValidations
CDC is conducting an influenza forecasting activity for selected countries and has been utilizing hubverse to coordinate model submissions and evaluations. As part of this workflow, we use hubValid...
If you use a packages from the #RUniverse on #GitHub using r-lib/setup-r-dependencies and are seeing an error that says "malformed DESCRIPTION" it might just be this bug: https://github.com/r-lib/pak/issues/771
In short: A recent deploy of the R Universe added a `File:` field in /src/contrib/PACKAGES that is causing the tarball to be named as the sha256 hash and {pkgbuild} (used by {pak}, which is used by r-lib/setup-r-dependencies) does not like that one bit.
One solution to work around this is to add the GitHub sources to the `packages:` field:
```
with:
packages: |
github::[user]/[repo]@[version]
```
coolbutuseless@Lluis_Revilla @bioinfhotep "OS_type" is correctly picked up by #Runiverse !
Build graphics show that {kissatire} is unix only and has a little minus sign for the build status on the right. :)
Ella KayeI just added a package to my #RUniverse packages.json but there was a problem updating the registry (was working fine before). The logs are here. https://github.com/r-universe/ellakaye/actions/runs/14268759000/job/39996861708. The problem seems to be in the line "fatal: could not read Username for 'https://github.com': terminal prompts disabled”. Is this a temporary glitch? If not, any ideas how to fix it? I have a PAT set up that seems to be working fine in other contexts.
We're excited and grateful that @RConsortium has named R-Universe their newest top-level project! This means sustained support for @rOpenSci's platform for discovery and publishing of R packages. We've got big plans ahead, especially to support building large, collaborative repositories on top of R-Universe.
All praise to @jeroenooms, R-Universe's lead developer, who will also join the Consortium's Infrastructure Steering Committee.
Read more at https://ropensci.org/blog/2024/12/03/r-universe-r-consortium-tlp/ #rstats #runiverse
rOpenSci🚀 Today is Community Call Day!
Navigating the R ecosystem using R-universe
With @jeroenooms - 09:00 PDT|16:00 UTC • online 🌐
Link to join + add to your calendar: https://ropensci.org/commcalls/nov2024-r-universe/
Jeroen will share details on what #RUniverse is and an update on what you can do with it today. He will also discuss the future of R-universe and how it can be used to navigate the #RStats ecosystem.
Join us to learn more about R-Universe and how you can use it to improve your R package development workflow.