Stephan Köstlbacher

149 Followers
193 Following
80 Posts
Postdoc at Thijs Ettena's lab, Wageningen University (NL)
Google scholarhttps://scholar.google.com/citations?user=OMR7NBYAAAAJ&hl=en

Into 🕷️#spiders, #Wolbachia, #Cardinium, #Rickettsiaceae, and/or #Rhabdochlamydia 🦠 endosymbionts? We've got you covered! Paper now available at #MicrobialGenomicsJournal (@MicrobioSoc)

#genomics of five co-occurring #symbionts of the spider Oedothorax gibbosus

https://doi.org/10.1099/mgen.0.000943

@DOME_Vienna @RBINSmuseum @fhendrickx @stephkoe @tamara_retlah

One to host them all: genomics of the diverse bacterial endosymbionts of the spider Oedothorax gibbosus | Microbiology Society

Bacterial endosymbionts of the groups Wolbachia , Cardinium and Rickettsiaceae are well known for their diverse effects on their arthropod hosts, ranging from mutualistic relationships to reproductive phenotypes. Here, we analysed a unique system in which the dwarf spider Oedothorax gibbosus is co-infected with up to five different endosymbionts affiliated with Wolbachia , ‘Candidatus Tisiphia’ (formerly Torix group Rickettsia ), Cardinium and Rhabdochlamydia . Using short-read genome sequencing data, we show that the endosymbionts are heterogeneously distributed among O. gibbosus populations and are frequently found co-infecting spider individuals. To study this intricate host–endosymbiont system on a genome-resolved level, we used long-read sequencing to reconstruct closed genomes of the Wolbachia , ‘Ca. Tisiphia’ and Cardinium endosymbionts. We provide insights into the ecology and evolution of the endosymbionts and shed light on the interactions with their spider host. We detected high quantities of transposable elements in all endosymbiont genomes and provide evidence that ancestors of the Cardinium , ‘Ca. Tisiphia’ and Wolbachia endosymbionts have co-infected the same hosts in the past. Our findings contribute to broadening our knowledge about endosymbionts infecting one of the largest animal phyla on Earth and show the usefulness of transposable elements as an evolutionary ‘contact-tracing’ tool.

RT @[email protected]

The MEB team at the University of Duisburg-Essen is currently looking for a PhD student who is enthusiastic about archaeal metabolism. We are looking forward to your application. https://twitter.com/VAAM_Microbes/status/1617489285137190913

🐦🔗: https://twitter.com/BettinaSiebers/status/1617832265593278464

VAAM - Vereinigung f. Allg. u. Ang. Mikrobiologie on Twitter

“Open position: @BettinaSiebers lab @unidue is looking for a PhD student https://t.co/Uj45shiVRU ⚠️Due to the hacker attack on the university Duisburg-Essen, previous applications were not delivered, so please apply again!”

Twitter
Thermal acclimation of methanotrophs from the genus Methylobacter - The ISME Journal

Methanotrophs oxidize most of the methane (CH4) produced in natural and anthropogenic ecosystems. Often living close to soil surfaces, these microorganisms must frequently adjust to temperature change. While many environmental studies have addressed temperature effects on CH4 oxidation and methanotrophic communities, there is little knowledge about the physiological adjustments that underlie these effects. We have studied thermal acclimation in Methylobacter, a widespread, abundant, and environmentally important methanotrophic genus. Comparisons of growth and CH4 oxidation kinetics at different temperatures in three members of the genus demonstrate that temperature has a strong influence on how much CH4 is consumed to support growth at different CH4 concentrations. However, the temperature effect varies considerably between species, suggesting that how a methanotrophic community is composed influences the temperature effect on CH4 uptake. To understand thermal acclimation mechanisms widely we carried out a transcriptomics experiment with Methylobacter tundripaludum SV96T. We observed, at different temperatures, how varying abundances of transcripts for glycogen and protein biosynthesis relate to cellular glycogen and ribosome concentrations. Our data also demonstrated transcriptional adjustment of CH4 oxidation, oxidative phosphorylation, membrane fatty acid saturation, cell wall composition, and exopolysaccharides between temperatures. In addition, we observed differences in M. tundripaludum SV96T cell sizes at different temperatures. We conclude that thermal acclimation in Methylobacter results from transcriptional adjustment of central metabolism, protein biosynthesis, cell walls and storage. Acclimation leads to large shifts in CH4 consumption and growth efficiency, but with major differences between species. Thus, our study demonstrates that physiological adjustments to temperature change can substantially influence environmental CH4 uptake rates and that consideration of methanotroph physiology might be vital for accurate predictions of warming effects on CH4 emissions.

Nature

RT @[email protected]

We will have a computation / lab postdoctoral position available April 1st 2023 with new group leader at @[email protected]. Please email [email protected] if interested.

🐦🔗: https://twitter.com/MartinPolz/status/1613249884349661189

Martin Polz on Twitter

“We will have a computation / lab postdoctoral position available April 1st 2023 with new group leader at @ShaulPollak. Please email [email protected] if interested.”

Twitter

RT @[email protected]

Did you ever wonder about the physiological, ecological, and evolutionary consequences of a low energy-yielding metabolism in anaerobic eukaryotes? I attempted to provide an answer in this essay: https://rdcu.be/c3xJa

🐦🔗: https://twitter.com/Sergiophyceae/status/1615034971114045462

RT @[email protected]

First manuscript from the ECSO Lab at Purdue! I explored the physiological, ecological, and evolutionary consequences of adopting an obligately anaerobic lifestyle by some eukaryotic lineages @[email protected] @[email protected] @[email protected] https://twitter.com/NatureMicrobiol/status/1615100015957114880

🐦🔗: https://twitter.com/Sergiophyceae/status/1615106188621881353

Nature Microbiology on Twitter

“Out now 👉 Energetics and evolution of anaerobic microbial eukaryotes Perspective by @Sergiophyceae https://t.co/uzjJUQEJga”

Twitter
Hauke Smidt on Twitter

“Exciting postdoc position available on the development of host-microbiome models to work at @MIB_WUR and Host Microbe Interactomics @wuranimal in the #PigParadigm project (https://t.co/YmXhBGhT79). https://t.co/ZXLinfa4Vb”

Twitter

RT @[email protected]

Exciting postdoc position available on the development of host-microbiome models to work at @[email protected] and Host Microbe Interactomics @[email protected] in the #PigParadigm project (https://projects.au.dk/pig-paradigm/).
https://www.wur.nl/en/vacancy/postdoc-integrated-host-microbiome-models.htm

🐦🔗: https://twitter.com/hauke_smidt/status/1614522994029641729

PIG–PARADIGM

RT @[email protected]

The last research chapter of my PhD thesis is out in @[email protected], perfectly in time for my defence later this month! https://doi.org/10.1093/molbev/msad011
The spliceosome is one of the most complex machineries in eukaryotes. How did this large intron-removing complex originate?🧵(1/7)

🐦🔗: https://twitter.com/JulianVosseberg/status/1613894470520688642