Caitlin Pepperell

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ID doc and population biologist. Prokaryote enthusiast. Faculty at UW Madison. Opinions mine & do not represent employers past or present.
Also interestingly, sub-populations encoding the element appear to inhabit slightly distinct niches, reflected in patterns of HGT
There is evidence of co-adaptation between element and the core genome, particularly a previously uncharacterized gene with fascinating proclivities
We found evidence that it moves around. But, despite its mobility, the element defines genetically distinct sub-populations.
But what does it do during natural infection?
We took a close look at the Gonococcal Genetic Island, which encodes a T4SS that can increase transformation efficiency in vitro.
The Gonococcal Genetic Island defines distinct sub-populations of Neisseria gonorrhoeae

The incidence of gonorrhoea is increasing at an alarming pace, and therapeutic options continue to narrow as a result of worsening drug resistance. Neisseria gonorrhoeae is naturally competent, allowing the organism to adapt rapidly to selection pressures including antibiotics. A sub-population of N. gonorrhoeae carries the Gonococcal Genetic Island (GGI), which encodes a type IV secretion system (T4SS) that secretes chromosomal DNA. Previous research has shown that the GGI increases transformation efficiency in vitro, but the extent to which it contributes to horizontal gene transfer (HGT) during infection is unknown. Here we analysed genomic data from clinical isolates of N. gonorrhoeae to better characterize GGI+ and GGI− sub-populations and to delineate patterns of variation at the locus itself. We found the element segregating at an intermediate frequency (61%), and it appears to act as a mobile genetic element with examples of gain, loss, exchange and intra-locus recombination within our sample. We further found evidence suggesting that GGI+ and GGI− sub-populations preferentially inhabit distinct niches with different opportunities for HGT. Previously, GGI+ isolates were reported to be associated with more severe clinical infections, and our results suggest this could be related to metal-ion trafficking and biofilm formation. The co-segregation of GGI+ and GGI− isolates despite mobility of the element suggests that both niches inhabited by N. gonorrhoeae remain important to its overall persistence as has been demonstrated previously for cervical- and urethral-adapted sub-populations. These data emphasize the complex population structure of N. gonorrhoeae and its capacity to adapt to diverse niches.

microbiologyresearch.org
Lucy Weinert & I are co-hosting a symposium on experimental evolution in non model organisms for SMBE: https://www.smbe2023.org/symposia
If you work in this area, please consider submitting an abstract. The due date is March 15. See you in Italy!
Symposia | Smbe2023

Smbe
A plea to scientists not to use the word "drastic" when describing marked, or dramatic differences
Lucy Weinert & I are co-hosting a symposium on experimental evolution in non model organisms for SMBE: https://www.smbe2023.org/symposia
If you work in this area, please consider submitting an abstract. The due date is March 15. See you in Italy!
Symposia | Smbe2023

Smbe
How does metabolic landscape influence the acquisition of antibiotic resistance? See this paper on N. gonorrhoeae by MD-PhD student Dan Rubin, which also shows the genetic basis for Ng's requirement for supplemental CO2: https://www.nature.com/articles/s41564-022-01282-x
CanB is a metabolic mediator of antibiotic resistance in Neisseria gonorrhoeae - Nature Microbiology

Metabolic variation via a single substitution in the β-carbonic anhydrase CanB determines CO2 dependence and influences fluoroquinolone resistance in Neisseria gonorrhoeae.

Nature