If you are someone who has ever thought running a bunch of samples through recount3 on your own hardware is a good idea, and you are horrid at writing shell scripts to manage it all, I've created a little #RStats package that helps with:

- running samples through recount-pump and unify;
- copying unify outputs into a directory that recount3 will see and load;
- checking your fq.gz files to make sure they aren't bad before running pump.

https://moseleybioinformaticslab.github.io/rc3helpers/

#Bioinformatics #RNASeq

recount3 Directory Helpers

Simple functions for creating a custom recount3 directory.