Should I just use long reads for my RNA splicing analysis? 🤔
If you are into studying transcriptomics variations using RNA sequencing you may be weighing your options for the next project in terms of long (ONT, PacBio) or short reads. Indeed, wherever I go for meetings or give talks I inadvertently get the question “Soo…What’s with long reads? Is that what we are supposed to do now?” There are good reasons for that.