again though. the e-bike rider is burning calories while riding. You basically have to add the calories they burned over the time of the commute because the normal cycling riders calories are not calories extra burned but just the calories they burned. So for example from your first link:
"Endurance exercise, like jogging or swimming, for more than 30 minutes can improve your fitness and help you lose weight. Running for half an hour can burn between 250 and 500 kilocalories. Swimming burns between 300 and 400 kcal in the same amount of time, with a front crawl burning up to 450 kcal. "
Needs to add in that sitting 30 minutes burns 66 calories in the example here https://captaincalculator.com/health/calorie/sitting/ They list fidgetting but riding the e-bike will be decently more than sitting in an office chair or car stilly. The variable from your linked article comes out a lot due to weight and extertion level. Bike commuting is usually done at a relaxed pace (unless your late!). I agree though with the top paragraph of @vividspecter