Jonathan EisenConvergent evolution at the sequence level is generally massively underestimated and not dealt with very well in many evolutionary studies ...
Miguel Correa@phylogenomics I've been thinking about this for a while but never delved seriously into it. Do you have any pointers to studies that get it right?
Trevor Krabbenhoft@phylogenomics Because of selection or neutral(ish) homoplasy?
Frank Aylward@phylogenomics protein level too, or mainly nucleotide?