Dr. Robert M Flight

@rmflight
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Research parasite* @universityofky. Interested in #openscience, #rstats, bioinformatics, #datavis he/him

*One who uses others data to conduct research, both publicly available data, and those from direct collaborations.

#fedi22

GitHubhttps://github.com/rmflight
Websitehttps://rmflight.github.io

#RStats {targets} hive-mind.

I have some list objects I want to concatenate together. Normally I would use `purrr::list_c`, but that doesn't seem to work in `tar_combine`, and `vctrs::vec_c` doesn't seem to like it either.

Error messages and code screen grab alt text.

Esteban the green crayon was at our Library summer kickoff party today!

I admit, that was pretty cool.

We don't need any Donato's here! Making a copycat chicken, provolone, spinach and tomato pizza.

Other one is half mozzarella cheese, half bacon and breakfast sausage.

Today is our 20th wedding anniversary. The eldest (15) decided to get us "china" for our anniversary.

I laughed a lot at our "china".

(Those who might not know, fine china or dishes are a relatively common anniversary gift).

When I did an analysis on 711 metabolomics datasets, I did a foolish thing, and all 6105 starting datasets got their own `targets` object, and I'd drop them as needed.

The `targets` cache was huge, even with a bunch of 44 byte NULL files.

So this time, I'm analyzing 3898, and I created a filtered list of the useful ones, and then split them into 20 sets of roughly 200 each. Small enough a set fits all in memory, and I can do parallel processing of correlations for the larger ones.

#RStats

Its not fancy, and I'm sure not even close to authentic in any way, but they were pretty tasty and filling.

But eldest with bowel issues doesn't seem to like black beans, period.

Maybe I need to find a bean salad recipe, or something with chickpeas that doesn't also involve cheese or yogurt (lactose intolerant, and we buy cheaper yogurts, that tend to be skim milk based, and therefore not all the lactose gets digested).

https://ianfujimoto.substack.com/p/how-to-feed-your-family-on-a-budget

This spider got inside our townhome today. Got them safely back outside.

What a cutie!

The measure 4 times, then have Lowes cut some sheeting with their ginormous saw that does really nice straight cuts method of replacing the particle board that holds the mattress.

Working with data from Metabolomics Workbench again, and it always feels like the data is yelling at me with the fields in all caps.

Now that I've double checked, the Protein Data Bank file format was like this too, all caps everywhere (even more so).

#metabolomics #bioinformatics

I definitely rolled a bunch of the dough out too thin.

At least they should still be tasty.