@nKiaru

112 Followers
62 Following
18 Posts

Microscopist and Image Analyst at EPFL SV Microscopy facility BIOP

Personal tweets of unknown SNR

This Game of Life is computed by tile, and lazily (you compute only what has to be displayed). What's cool about it is that you can pause computation and see what has been computed so far. For instance, if you request a small tile late in time, you can see the 'causal cone' of the computed tile:
Replace t with z -> and now we have a nice view of the game of life dynamics
Now I can do ImageJ stuff, like reslice and look for the game of life intensity decay over time (it bleaches!) Does anybody know what's the theoretical curve ? It's probably known right ? ( with a 50/50 live dead random start )
Hehe, the first game of life I code (in #FijiSc
using #BigDataViewer
obviously). Naive implementation, but still functionally defined and lazy computed - see how the data arrives as I scroll, and is cached.

The #Roscoff Culture Collection 🇨🇵 of #marine #microorganisms 🌊 🦠 is seeking a #postdoc to work on ex situ microbiome interactions (EU projects #MICROBE and #BlueRemediomics 🇪🇺).

One objective is to define synthetic #microbiomes to promote the growth of selected #microeukaryotes (#microalgae, saprotrophs) and for optimal production of #metabolites of interest.

https://roscoff-culture-collection.org
https://www.microbeproject.eu
https://blueremediomics.eu
#protists #microbiology #job #bretagne #france

Welcome to the Roscoff Culture Collection | Roscoff Culture Collection

A Sneak Peek at StableValue and SegmentMapper in Java

_This video demystifies the work that is going on in two different efforts to make Java even better: *StableValues* and *SegmentMapper* .__Some internal JDK ...

YouTube
Here's a nice cell division! Taken with the Zeiss Lattice Light Sheet 7 and visualized with 3x#BigVolumeViewer.
A tradition - showing off with #BigDataViewer This time by making the ABBA (go.epfl.ch/abba) logo with 4900 multiresolution images, each with a custom affine transform. Smooth when zoomed in, lagging a bit from afar but still very manageable.
Here's a small recursive image of the Fiji logo made in #ImageJ and #Fiji
A classic in dynamical systems: the Lorenz attractor, computed and visualized using #Fiji in #BigDataViewer