Egon Willighagenwelcome to the live coverage of #SWAT4hcls !
We're kicking off day 2 of the symposium with a keynote by Janna Hastings!
Janna's @wdscholia page (and @ORCID_Org): https://qlever.scholia.wiki/orcid/0000-0002-3469-4923
Mastodon: @jannahastings
after covering some of her past ontology work, JH is introducing us to the Behaviour Change Intervention Ontology (BCIO): https://www.bciontology.org/
"here the key thing is a research report"
JH shows recent work where they use LLMs together with chemical similarity knowledge to do ChEBI ontology classification, the chebifier: https://chebifier.hastingslab.org/ and https://doi.org/10.1039/D3DD00238A
the 2nd talk is by a team of two speakers from the IDS team at Maastricht University (Dumontier's group) about Embedding-based Deduplication of Knowledge Graphs using Graph Neural Networks
I think this would be a very interesting alternative to find WikiPathways/Rhea matches we previous did with federated SPARQL!
the third talk is introduced by @Andrawaag and remotely given by Robert Hoehndorf, about ontological modelling of dynamic biodiversity consensus
Of course, this is also what the #Wikiblitz ongoing here is about
the first talk after the coffee break is about STELA and "Unifying SNOMED CT Logical Expressions and Textual Descriptions"
the next speaker is Olga Endrich, taking about "Rx Norm for Europe - Toward the representation of medicinal products in the OMOP CDM"
third speaker is Sergi Aguiló-Castillo (@Radboud_uni) who will talk about Automated Quality Metrics Assessment in Real World Data for Rare Diseases Registries.
AutoQ-RWD: https://github.com/cmbi/AutoQ-RWD
last speaker before lunch is Lilly Schuckert about data for neuromuscular diseases
LS concluded her talk and mentioned their semantic mapping data is available from Zenodo: https://doi.org/10.5281/zenodo.18350592