Mike Honey

Here's the latest variant picture for Tasmania, Australia.

The "Deltacron" XAY.* variant (45%) has continued to dominate, the most success this variant has seen globally. The driving child lineage is GL.1.

#COVID19 #Tasmania #XAY #GL_1 #Deltacron @auscovid19
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Sep 15, 2023 at 1:15pmWeb
Show threadMike HoneySep 15, 2023
The GL.1 samples from Tasmania have acquired a further Spike 144del mutation, h/t @siamosolocani
https://x.com/siamosolocani/status/1702588613404299592?s=20
Federico Gueli 🇺🇳 on X

A sublineage of GL.1 (XAY.1.1.1+S:D420N , Deltacron)carrying S:Y144del became dominant in Tasmania during the month of August 2023. It is the first time XAY reached this kind of prevalence. cc @DarrenM98230782

X (formerly Twitter)
Show threadMike HoneySep 15, 2023

Sample volumes were a bit patchy in early August, but look representative up to September 3.

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

Interactive mutation matching dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/sars-cov-2-genomes#gisaid---mutation-matches

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GitHub - Mike-Honey/covid-19-genomes: Projects on COVID-19 topic of genomic sequencing - mostly DataViz

Projects on COVID-19 topic of genomic sequencing - mostly DataViz - Mike-Honey/covid-19-genomes

GitHub