Turns out RNA can make a GNRA tetraloop-like motif out of almost anything! Like in these pentaloops, whose looped-out bases interact with proteins.
Read the preprint:
https://biorxiv.org/content/10.1101/2025.07.03.663028v1
#RNA #Structure #3D #GNRA #Tetraloop #Motif #Research #RNAprotein #Interactions
In the raiA ncRNA structure that we recently determined, we identified a junction strand (B) that mimics both the GAAA-tetraloop (A) AND the D-loop/T-loop interaction motif (C) - how cool is that?
Find out more:
https://doi.org/10.1016/j.jmb.2024.168833
#RNA #research #science #Structure #structuralbiology #cryoEM #junction #tetraloop #strand #motif #Dloop #Tloop #GAAA #GNRA #raiA

Cryo-EM Structure of raiA ncRNA From Clostridium Reveals a New RNA 3D Fold
Advancements in genome-wide sequence analysis have led to the discovery of numerous novel bacterial non-coding RNAs (ncRNAs). These ncRNAs have been c…