OrthoFinder (Evolutionary biology 🧬)

OrthoFinder is a command-line software tool for comparative genomics. OrthoFinder determines the correspondence between genes in different organisms. This correspondence provides a framework for understanding the evolution of life on Earth, and enables the extrapolation and transfer of biological knowledge between organisms. OrthoFinder ta...

https://en.wikipedia.org/wiki/OrthoFinder

#Orthofinder #Phylogenetics #EvolutionaryBiology #BioinformaticsSoftware

OrthoFinder - Wikipedia

@eporetsky Thanks! #orthoFinder is a great tool, and it generates a species tree relatively quickly (for multiple species), but we don't have gene models (=protein sequences) yet.
@inspirace I never used it for that but #orthoFinder generates a species tree based on all protein orthogroups