🎥 New Video: Cloud-based Bioimage Analysis at EMBL

How do we handle the massive data volumes in modern microscopy? Yi Sun (Research Software Engineer at EMBL) breaks down the cloud-native workflows used by the Bioimage Analysis Support Team.

📺 Watch the full webinar: https://www.youtube.com/watch?v=ntwdwCi4Y6k

A great joint effort by @deNBI and @ghga

#Bioinformatics #BioimageAnalysis #EMBL #CloudComputing #OpenScience #Imaging #deNBI #GHGA

🇮🇹 Greetings from Rome!

Last week, the HUPO-PSI Spring Meeting at the CNR brought together the global community to advance open data standards for #proteomics and #metabolomics. 🧬

@deNBI was thrilled to be part of the discussions! We organized a successful workshop Metabolomics & MS Data Standards fostering collaboration across the field. 🤝

Standardization is key to reproducible science! 🚀

#HUPOPSI #OpenData #Bioinformatics #deNBI #Metabolomics #MassSpec #FAIRdata #ScienceEvents

🧬 Proteomics Workshop in Helsinki! 🇫🇮

Join us on April 30th at the University of Helsinki for an intensive day of mass spectrometry analysis. From LC-MS/MS basics to advanced DDA/DIA quantitation using OpenMS and OpenDIAKiosk.

📍 Meilahti Campus, Biomedicum 1, Sali 3
🕘 30th April - 09:00 - 17:00
💻 Note: This is a hands-on course—please bring your laptop!
🔗 https://www.denbi.de/training-courses-2026/2086-ms-analysis-with-openms-and-opendiakiosk

#Proteomics #Bioinformatics #MassSpec #OpenMS #Helsinki #UniHelsinki #Science #deNBI

🧬 Next @deNBI training course: Nanopore Sequencing 101: 🧬

Join us for a deep dive into ONT technology! 🚀

📅 30 June - 2 July 2026
📍 Bielefeld, Germany
💻 Focus: Linux basics, Library Prep, de.NBI Cloud, Genome Assembly & Metagenomics.
🛠️ Tools: Dorado, Flye, CheckM, Bakta & more!

Perfect for PhDs & Postdocs. No prior bioinformatics knowledge required 🐧

Register here: https://www.denbi.de/training-courses-2026/2071-nanopore-sequencing-101-from-library-prep-to-genomics-and-metagenomic-analysis

#Genomics #Bioinformatics #Nanopore #ONT #Bielefeld #deNBI #ScienceTraining #Metagenomics #Linux

Are you passionate about Computational Proteomics and Plant Science? The @tu_muenchen is looking for a Doctoral Candidate (f/m/d) to join their visionary graduate college.

🔍 The Project: Build Graph Neural Networks to predict protein-protein interactions in crops.

💼 Offer: 4-year position (TV-L E13) starting Oct 2026.
📅 Deadline: 30 May 2026
📍 Location: Freising/Munich, Germany

👉 Apply now: https://www.denbi.de/news1/2077-doctoral-candidate-f-m-d-in-computational-proteomics-bioinformatics

#Bioinformatics #Proteomics #PlantScience #PhDPosition #TUM #deNBI

#nfcore and #VirJenDB plan a hybrid #hackathon on 17 May as a satellite event of #ViBioM2026 toward #opensource #virus #bioinformatics workflows.

Proposed projects
- expand VirJenDB visualizations with an atlas
- work on an existing nf-core virus workflow
- port your tool to bioconda and other #Nextflow prep

👉 Propose your project and indicate your interest: https://forms.gle/KWJYPCXgGotmrhCu8.

📝 Registration opens April 2026! More: https://tinyurl.com/mefewbw4.

#EVBC #deNBI

Have you already checked out the IWC - the Intergalactic Workflow Commission that provides curated and tested #usegalaxy workflows to you?

https://iwc.galaxyproject.org

119 scientific workflows! And the best is that you can start them from the IWC website at your favourite Galaxy server using free academic resources.

#denbi #nfdirocks #eosc

Detecting 🐘 in images via #usegalaxy on a mobile phone.

#denbi #nfdirocks

Too much data? 🧬💻

@deNBI provides the infrastructure you need to succeed:
✅ Free bioinformatics tools & services
✅ High-quality training for life scientists
✅ Cloud resources for German research

Don't start from scratch—start with us!
🔗 Read the Flyer 📄 --> www.denbi.de/images/Downloads/deNBI_Flyer_What_is_deNBI.pdf

#Bioinformatics #OpenScience #deNBI #LifeScience