@nfdi4bioimage started the new year with enthusiasm and many plans, and you'll find what's new, what's upcoming, and what's to read or review in our latest newsletter.
Take a look to find out about the latest developments within the @NFDI and get an overview of upcoming conferences, workshops, and publications related to #bioimaging research data management for the upcoming year.
📨 https://nfdi4bioimage.de/community-integration/newsletter/#c896618
Job Alert
PhD Candidate (m/f/d)
Deadline: 2026-02-02
Location: Germany - Dortmund
https://www.academiceurope.com/ads/phd-candidate-m-f-d/
#hiring #PhD #CardiovascularResearch #Immunology #Bioimaging #naturalsciences #biology #biochemistry #LifeSciences
🧬 How can AI bridge the gap between histology and spatial transcriptomics?
🔗 SegDecon bridges histology and transcriptomics through AI-based nuclei segmentation and image-informed spatial deconvolution. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.10.041
📚 CSBJ: https://www.csbj.org/
#SpatialTranscriptomics #Histology #Genomics #SystemsBiology #NucleiSegmentation #AI #CellBiology #TissueBiology #Bioimaging
New tutorial from the Galaxy Training Network! Learn how to quantify gel electrophoresis bands using QuPath + Galaxy. Fully open, reproducible, and beginner-friendly.
https://training.galaxyproject.org/training-material/news/2025/08/18/bands_image_analysis.html
@galaxyproject
#Bioinformatics #ImageAnalysis #GelElectrophoresis #OpenScience #ReproducibleResearch #GalaxyProject #QuPath #Bioimaging #LifeSciences #OpenSourceTools #ScienceEducation #DataAnalysis #ResearchTools
Gel Electrophoresis is a staple of molecular biology, providing a way to separate DNA, RNA, or proteins by size and charge. While gels are usually interpreted visually, the ability to quantify band intensities offers much richer insights—allowing researchers to estimate product yields, verify PCR amplification, or assess protein purity.
New tutorial from the Galaxy Training Network! Learn how to quantify gel electrophoresis bands using QuPath + Galaxy. Fully open, reproducible, and beginner-friendly.
https://training.galaxyproject.org/training-material/news/2025/08/18/bands_image_analysis.html
@galaxyfreiburg
#Bioinformatics #ImageAnalysis #GelElectrophoresis #OpenScience #ReproducibleResearch #GalaxyProject #QuPath #Bioimaging #LifeSciences #OpenSourceTools #ScienceEducation #DataAnalysis #ResearchTools
Gel Electrophoresis is a staple of molecular biology, providing a way to separate DNA, RNA, or proteins by size and charge. While gels are usually interpreted visually, the ability to quantify band intensities offers much richer insights—allowing researchers to estimate product yields, verify PCR amplification, or assess protein purity.
On Day 2 of European Galaxy Days, Beatriz Serrano-Solano presented Update by the Imaging Community.
Read more: https://galaxyproject.org/community/sig/image-analysis/
@galaxyfreiburg
#imaging_community #bioimaging #EGD2025 #galaxyproject #eosc #fair #community #open_science
Amazing talk by Björn Grüning from @galaxyfreiburg at @unifreiburg and task area leader @nfdi4bioimage on the power of #Galaxy at #CoRDI2025. Cloud-deployed workflows as a basis for reuse across domains.
An example? Voronoi segmentation in #bioimaging, forest imagery & astronomy. 👏
Interested in the intersection of #bioimaging and #datascience?
The "Bio-Image Data Science Lectures 2025 @unileipzig / ScaDS.AI Dresden/Leipzig developed by @haesleinhuepf, provide theoretical foundations and practical skills — including #Python programming, #machinelearning, #deeplearning, #LLMs, research data, and software management. Structured over several months, the material is perfect for students, researchers, and #selfstudy.
NFDI4BIOIMAGE
Academic Europe
de.NBI & ELIXIR Germany
CSBJ
Galaxy-Team der Uni Freiburg
galaxyproject
Yves Vincent Grossmann