nf-coreOct 28

Pipeline release! nf-core/demultiplex v1.7.0 - 1.7.0!

Demultiplexing pipeline for sequencing data

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.7.0

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.7.0 · nf-core/demultiplex

What's Changed Adding mgikit demultiplexing by @ziadbkh in #299 Important! Template update for nf-core/tools v3.3.2 by @nf-core-bot in #334 Change samplesheet to point to trimmed fastqs by @SPPea...

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nf-coreApr 24, 2025

Pipeline release! nf-core/demultiplex v1.6.1 - 1.6.1!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.6.1

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.6.1 · nf-core/demultiplex

What's Changed Fix adapter parsing from samplesheets by @edmundmiller in #315 Test samplesheet adapter removal at the pipeline level by @edmundmiller in #316 Json schema improvements by @Oliversin...

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nf-coreFeb 19, 2025

Pipeline release! nf-core/demultiplex v1.6.0 - 1.6.0!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.6.0

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.6.0 · nf-core/demultiplex

What's Changed Add samplesheet generation for sarek/methylseq by @lmfaber in #308 Replace [] with null as default by @FriederikeHanssen in #310 New Contributors @lmfaber made their first contrib...

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nf-coreDec 10, 2024

Pipeline release! nf-core/demultiplex v1.5.4 - 1.5.4 - 2024-12-10!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.4

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.5.4 - 2024-12-10 · nf-core/demultiplex

What's Changed Post 1.5.3 release version bump by @atrigila in #287 Fix parameter validation in test_full and workflow dispatch by @atrigila in #290 Bump samshee by @apeltzer in #291 Fixed email b...

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MultiQCNov 23, 2024

Just out: @multiqc v1.25.2 🎉

This patch release fixes a whole host of bugs, the most important one being for #bcl2fastq 🐛

There are also a host of small additions sneaking in for #ngsbits, #picard, #Nanostat, #Samtools and more - so well worth the update!

https://github.com/MultiQC/MultiQC/releases/tag/v1.25.2

Release v1.25.2 · MultiQC/MultiQC

MultiQC v1.25.2 - 2024-11-20 Multiple bug fixes and minor updates. Updates Add natural sort for sample sorting (#2959) Custom content: for plot_type: image, support custom_data config with section...

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nf-coreNov 6, 2024

Pipeline release! nf-core/demultiplex v1.5.3 - 1.5.3 - 2024-11-06!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.3

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.5.3 - 2024-11-06 · nf-core/demultiplex

1.5.3 - 2024-11-06 Added Changed #275 Update samshee module from nf-core. #276 Template update for nf-core/tools v3.0.2 #284 nf-core modules and subworkflows update. nf-test version update. #285 B...

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nf-coreOct 7, 2024

Pipeline release! nf-core/demultiplex v1.5.2 - 1.5.2!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.2

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.5.2 · nf-core/demultiplex

What's Changed Updated modules and subworkflows by @nschcolnicov in #259 Fixed adapter removal by @nschcolnicov in #265 Update diagram by @atrigila in #266 Added miniseq bclconvert test by @nschco...

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nf-coreAug 20, 2024

Pipeline release! nf-core/demultiplex v1.5.1 - 1.5.1 - Ripped Titanium Snake Patch!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.1

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.5.1 - Ripped Titanium Snake Patch · nf-core/demultiplex

1.5.1 Fixed #253 Fixed mkfastq output channels.

GitHub
nf-coreAug 13, 2024

Pipeline release! nf-core/demultiplex v1.5.0 - 1.5.0 - Ripped Titanium Snake!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.0

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Release 1.5.0 - Ripped Titanium Snake · nf-core/demultiplex

1.5.0 - 2024-08-12 Added #202 Added cellranger mkfastq subworkflow for demultiplexing 10x samples. #206 Add test with uncompressed data. #208 Added parameter for removing adapter information from ...

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