RE: https://genomic.social/@jfy133/116091864495660495

😤 Do you work with #sequencing data, and find it frustrating to fill in #metadata to make your data more #FAIR ?

💡 Reminder of the survey on #genomics metadata standards below!
📅 Deadline on the 20th March!
🎰 We have a raffle to win a little prize pack

#Linux tools for examining #sequencing data:

```
zcat sequences.fastq.gz | \
awk 'NR % 4 == 2 { print substr($0, 0, 10) }' |\
sort | uniq -c | sort -nr > index_list
```

Generates a list of the first 10 bases in sequences.fastq.gz, sorted by frequency. Handy if you need to check that the indexes you thought you used are in fact the ones that were used.

```
$ head index_list
10765621 ACGTACTGTG
9006389 AACCACGCTT
6891089 ACACCGTTGC
5198342 AGAAGCCATT
4202651 AATCGAGGTG
3788448 ACCTTGTGCA
3271929 ACGAGTTGCA
3027755 ACCGATTGCA
2682797 ACTATCCGTG
54372 ACGTANTGTG
...
```

This may become a blogpost at some point.

#bioinformatics

Postdoctoral Fellow Position in Human Inner Ear Computational Biology
Sunnybrook Research Institute

Come join Dabdoub #Lab at Sunnybrook #Research #Institute as a #bioinformatics #postdoctoral #fellow focusing on #single-cell & #multiomic #sequencing

See the full job description on jobRxiv: https://jobrxiv.org/job/sunnybrook-research-institute-2777...
https://jobrxiv.org/job/sunnybrook-research-institute-27778-postdoctoral-fellow-position-in-human-inner-ear-computational-biology/?fsp_sid=9783

Postdoctoral Fellow Position in Human Inner Ear Computational Biology
Sunnybrook Research Institute

Come join Dabdoub #Lab at Sunnybrook #Research #Institute as a #bioinformatics #postdoctoral #fellow focusing on #single-cell & #multiomic #sequencing

See the full job description on jobRxiv: https://jobrxiv.org/job/sunnybrook-research-institute-2777...
https://jobrxiv.org/job/sunnybrook-research-institute-27778-postdoctoral-fellow-position-in-human-inner-ear-computational-biology/?fsp_sid=9734

This image was widely shared suggesting that whole-genome sequencing now costs $100. What caught my attention, however, is the apparent plateau around $1,000 for a decade (2014–2024), followed by a sudden drop to $100. What accounts for this shift?

#science
#genome
#sequencing
#DNA

Postdoctoral Fellow Position in Human Inner Ear Computational Biology
Sunnybrook Research Institute

Come join Dabdoub #Lab at Sunnybrook #Research #Institute as a #bioinformatics #postdoctoral #fellow focusing on #single-cell & #multiomic #sequencing

See the full job description on jobRxiv: https://jobrxiv.org/job/sunnybrook-research-institute-2777...
https://jobrxiv.org/job/sunnybrook-research-institute-27778-postdoctoral-fellow-position-in-human-inner-ear-computational-biology/?fsp_sid=9552

Postdoctoral Fellow Position in Human Inner Ear Computational Biology
Sunnybrook Research Institute

Come join Dabdoub #Lab at Sunnybrook #Research #Institute as a #bioinformatics #postdoctoral #fellow focusing on #single-cell & #multiomic #sequencing

See the full job description on jobRxiv: https://jobrxiv.org/job/sunnybrook-research-institute-2777...
https://jobrxiv.org/job/sunnybrook-research-institute-27778-postdoctoral-fellow-position-in-human-inner-ear-computational-biology/?fsp_sid=9475

Postdoctoral Fellow Position in Human Inner Ear Computational Biology
Sunnybrook Research Institute

Come join Dabdoub #Lab at Sunnybrook #Research #Institute as a #bioinformatics #postdoctoral #fellow focusing on #single-cell & #multiomic #sequencing

See the full job description on jobRxiv: https://jobrxiv.org/job/sunnybrook-research-institute-2777...
https://jobrxiv.org/job/sunnybrook-research-institute-27778-postdoctoral-fellow-position-in-human-inner-ear-computational-biology/?fsp_sid=9363