📅 July 23: Alex Wagner (Nationwide Children's Hospital) joins the GHGA lecture series to discuss VRS—a @ga4gh standard for consistent genetic variant exchange. Don’t miss it!
🔗 Register: https://dkfz-de.zoom.us/meeting/register/x-x6EwMsRAiWm-OvR6Vi8g#/registration

#Genomics #GA4GH #VRS #GHGA

Finding genomic and clinical information can be challenging in a world full of data 🔎🧬 What if there was a tool to help?

Check this video about #GA4GH Beacon, the API that works as a search engine for specific queries on genomic and biomedical data ▶️↘️

https://youtu.be/Z13sklz9Ylk

GA4GH Beacon, the API to search for specific queries on genomic and biomedical data

In a hyperconnected world full of data, finding genomic and clinical information can be challenging. What if there was a tool to help locate these data? GA4G...

YouTube
Using htsget-rs GA4GH's public endpoint https://umccr.org/blog/htsget-rs-crypt4gh/ #GA4GH #bioinformatics
Using htsget-rs GA4GH's public endpoint | UMCCR Genomics Platform Group

htsget-rs demo up and running at GA4GH

UMCCR Genomics Platform Group

Working on #GA4GH projects under VRSed conditions.

@a ¯\_(ツ)_/¯

Congratulations to Rahel Paloots for passing her defence for a PhD with the topic “Molecular Heterogeneity among Cancer Cell Lines and their Correspondence to Primary Neoplasias”! Rahel has been a contributor to progenetix.org and the main developer behind cancercelllines.org (a resource for, well, #cancer #celllines…) - but also to the #GA4GH & #ELIXIR Becaon project.

As one of the #GA4GH Beacon leads I’m happy about seeing the increasing uptake of this genomic data discovery protocol - and we try to help with our own “bycon” implementation (github.com/progenetix/bycon/; the one running progenetix.org). But increasing uptake => more requests for help & support ¯\_(ツ)_/¯

From: @elixir_europe
https://mstdn.science/@elixir_europe/112060077147997049

ELIXIR Europe (@[email protected])

Attached: 1 image #Beacon 🧬 is designed to enable the benefits of data discovery while minimising the associated risks. 🔍 It is a Global Alliance for Genomics and Health API specification, allowing easy discovery of sensitive data that require controlled (authorised) access. Today’s #ELIXIRFridayReads shares 12 quick tips for deploying a Beacon ➡️ https://doi.org/10.1371/journal.pcbi.1011817 European Genome-phenome Archive (EGA)

mstdn.science
On my way to the #GA4GH plenary in San Francisco. I hope this train in #zurich will bring me there…
Having a blast at the #VICC #CIViC #ClinGen hackathon reception at #CGC2023, sponsored by the Global Alliance for Genomics and Health #GA4GH
Current #GA4GH #ELIXIREurope #Beacon protocol work mode: Tuscan.