We are happy to announce the "NL-BioImaging Advanced Image Analysis course for biologists", 21–24 September at Erasmus MC in Rotterdam.

More info and register here:
https://courses.microscopie.nl/?event_id=527

Four hands-on days going from segmentation to full pipelines:
- Automate reproducible image processing with Jupyter notebooks
- Assess classical and AI approaches for specific challenges
- Train and optimise deep learning models on biological datasets
- Document and publish reproducible image analysis pipelines

Guidance from experts across the Netherlands.
Limited to 20 participants.

Feel free to tag colleagues or share this with your network!

#bioimaging #imageanalysis #course #openscience
#cellpose #OMERO #Jupyter #napari #FAIRdata
NL-Bioimaging #NVvM

In the latest issue of #JCellSci, with Stefania Marcotti, Lina Gerontogianni, Gavin Kelly, & David J. Barry, a reanalysis of images from the #IDR to answer the age-old question:

How do you tell #statistical #significance from #biological significance?

📝 https://doi.org/10.1242/jcs.264367

#Neuroscience #Statistics #Biology #imageanalysis #Bioimaging #imaging #bioimageanalysis

🔬 A breakthrough for spatial biology? This ultrafast 3D imaging method enables deep whole-organ visualization faster than ever before.

🔗 Rapid 3D Immunolabeling and Light Sheet Microscopy for Quantitative Analysis of Intact Tissues. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0121

📚 CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#Bioimaging #3DImaging #LightSheetMicroscopy #TissueBiology #Microscopy #CellBiology #SpatialBiology #Histology

Thank you to organisers @fran_bottanelli, @guijacquemet, Michael Way and Giulia Zanetti and everyone who joined us at this week's Journal of Cell Science meeting on 'Imaging Cell Dynamics'.
https://journals.biologists.com/jcs

#JCSimaging #imaging #biology #bioimaging #CellBiology

Practical Implementation of FAIR Bioimaging Workflows in Plasma Medicine

At the 5th Workshop on FAIR Data in #PlasmaScience (FDPS-V) at @ruhr-uni-bochum.de, @mohsenahmadi presented his work integrating research data management systems for #bioimaging in plasma medicine with Jupyter Notebook workflows. His presentation highlighted practical strategies to support #FAIR and interoperable bioimaging data handling in plasma medicine research.

👉 Find out more: https://www.biorxiv.org/content/10.64898/2026.01.26.700509v1.full

🔬 New #SpectralUnmixing paper by Ashesh et al. ( @florianjug): A #DeepLearning-based framework #MicroSplit for #FluorescenceMicroscopy that separates highly overlapping #fluorophore signals directly from multiplexed #ImagingData. Improves signal separation, reduces crosstalk, & enables more accurate multi-channel #imaging w/o requiring extensive reference measurements. Can’t wait to try this out on our in vivo #2P/ #3P imaging data:

📝 https://doi.org/10.1038/s41592-026-03082-1

#Bioimaging

@nfdi4bioimage started the new year with enthusiasm and many plans, and you'll find what's new, what's upcoming, and what's to read or review in our latest newsletter.

Take a look to find out about the latest developments within the @NFDI and get an overview of upcoming conferences, workshops, and publications related to #bioimaging research data management for the upcoming year.

📨 https://nfdi4bioimage.de/community-integration/newsletter/#c896618

Job Alert

PhD Candidate (m/f/d)

Deadline: 2026-02-02 
Location: Germany - Dortmund  

https://www.academiceurope.com/ads/phd-candidate-m-f-d/

#hiring #PhD #CardiovascularResearch #Immunology #Bioimaging #naturalsciences #biology #biochemistry #LifeSciences