"GA4GH VRS for the Semantic Web" https://doi.org/10.37044/osf.io/qy4td_v1

"We implemented an RDF Schema in ShEx, using OWL ontologies in the OBO Foundry such asthe NCI Thesaurus (NCIT), the Semanticscience Integrated Ontology (SIO), and the Genome Variation Ontology (GVO). We based our modelling on the VRS Schema expressed in YAML accessed during the BioHackathon 2024 week, i.e., 25-31 August and in the design principles currently used to update the GA4GH Phenopackets standard in RDF (Kaliyaperumal et al.,2022)" https://index.biohackrxiv.org/2026/04/13/qy4td.html

#phenopacket #rdf #ontology #bioinformatics #BH24JP

OSF

2025 has come to an end. This year, we published 45 preprints resulting from 16 different biohackathons. Sometimes reports come in late, as we will see. A quick list of #biohackathon meetings with preprints in 2025:

- DBCLS BioHackathon 2023 #BH23JP: https://index.biohackrxiv.org/tag/BH23JP
- DBCLS BioHackathon 2024 #BH24JP: https://index.biohackrxiv.org/tag/BH24JP
- DBCLS BioHackathon 2025 #BH25JP: https://index.biohackrxiv.org/tag/BH25JP

- BioHackathon Europe 2023 #BH23EU: https://index.biohackrxiv.org/tag/BH23EU
- BioHackathon Europe 2024 #BH24EU: https://index.biohackrxiv.org/tag/BH24EU
- BioHackathon Europe 2025 #BioHackEU25: https://index.biohackrxiv.org/tag/BioHackEU25

- 2nd BioHackathon Germany 2023 #BH23DE: https://index.biohackrxiv.org/tag/BH23DE
- 3rd BioHackathon Germany 2024 #BH24DE: https://index.biohackrxiv.org/tag/BH24DE

- 16th International SWAT4HCLS Conference 2025 #SWAT4HCLS25: https://index.biohackrxiv.org/tag/SWAT4HCLS25

And seven others! A full overview is found on this page: https://index.biohackrxiv.org/meetings/

DBCLS BioHackathon 2023

Preprints for BioHackathons

BioHackrXiv Preprints