Galaxy-Team der Uni FreiburgOct 16

Galaxy can be adjusted for sensitive data.
In the Netherlands, a GDPR-compliant Galaxy clone runs in an isolated network, converting Toolshed tools to Apptainer containers—secure, auditable, and reproducible.
Read more: https://galaxyproject.org/news/2025-01-20-esg-w-p5/

#UseGalaxy #GalaxyProject #UniFreiburg #EOSC #EuroScienceGateway #SensitiveData #GDPR #PrivacyByDesign #ReproducibleResearch #Bioinformatics #Apptainer #DataGovernance #Netherlands

Galaxy instance for sensitive data running in isolated network environ

GDPR-compliant Galaxy clone in isolated environment

Show threadchrisOct 15
@gnulinux Danke für den podcast zu #Apptainer :) Gab mir als früher intensiver Nutzer von #hpc einen informativen Einblick, was aus Singularity entstanden ist, und zu den aktuellen Möglichkeiten mit containern und wissenschaftlichem Rechnen 
Jens HannemannJul 19

My head hurts. Doing a deep-dive into containerization/VM with #Jenkins. So many options. I think I'll give #LXD a shot. But frankly, since my #OpenMPI program is already containerized via #Apptainer, I'll just go ahead and build on the (fairly powerful) Jenkins host for now, just to get the pipeline built as a proof of concept.

Time for an adult beverage.

N-gated Hacker NewsJun 26, 2025
🎩✨ Behold, the marvel of Apptainer: the magical name change from #Singularity that will revolutionize your Linux container universe by... being exactly like every other container system but with more labels. 🌟🔒 Rejoice as your software components remain safely ensconced in their digital dungeons, as you navigate the labyrinthine #GitHub to inspect your secured, portable future. 🤖🔍
https://apptainer.org/ #Apptainer #LinuxContainers #SoftwareDevelopment #HackerNews #ngated
Apptainer - Portable, Reproducible Containers

Apptainer is an open source container platform designed to run complex applications on high-performance computing (HPC) clusters in a simple, portable, and reproducible way.

Hacker NewsJun 26, 2025

Apptainer: Application Containers for Linux

https://apptainer.org/

#HackerNews #Apptainer #Application #Containers #Linux #Technology #OpenSource

Apptainer - Portable, Reproducible Containers

Apptainer is an open source container platform designed to run complex applications on high-performance computing (HPC) clusters in a simple, portable, and reproducible way.

Show threadJens HannemannJun 10, 2025
@beardedtechguy Doing some literature review for a grant application and trying to figure out how to do SCIF apps in #Apptainer. They're jackhammering the hell out of the pavement in front of my office, so I sought refuge in the student center's Starbucks.
Show threadYann Büchau May 31, 2025
#Python #poetry (and #uv I guess) is NOT a comprehensive tool to pin your environment! It is JUST a tool to help you manage some downstream Python packages, that's it. Use something more powerful like  #nix flakes or #apptainer​s or whatever floats your boat to do proper pinning of an environment - where you can pin your package manager itself.
Show threadJens HannemannMay 27, 2025

@beardedtechguy Welcome back! And I guess congratulations are in order

Grading and accreditation work are done here, too, for now. I’m currently picking up my NASA work again, building an #Apptainer container to be shipped to Oxford University. Also getting ready to upgrade my #HamRadio license and working on improving my wireless communications class for next semester.

Show threadJens HannemannMay 23, 2025
@cliffwade Morning, Cliff. We're getting a new roof as we speak. Hopefully will be done by 6pm tonight. I’ll be shipping some NASA code via #Apptainer to Oxford University after tracking down some bugs in both apptainer and the code itself. I'll spend the weekend studying up a bit to upgrade my #HamRadio license and thinking about how to improve my wireless communications class for next semester. There will be the occasional beer sprinkled in for relaxation.
Jens HannemannMay 18, 2025
Building an #Apptainer container for our colleagues in Oxford. The task is made much more pleasant by the awesome weather and a bottle of #Jever Pilsener. It’s very nice outside sitting on the deck.