Galaxy can be adjusted for sensitive data.
In the Netherlands, a GDPR-compliant Galaxy clone runs in an isolated network, converting Toolshed tools to Apptainer containers—secure, auditable, and reproducible.
Read more: https://galaxyproject.org/news/2025-01-20-esg-w-p5/

#UseGalaxy #GalaxyProject #UniFreiburg #EOSC #EuroScienceGateway #SensitiveData #GDPR #PrivacyByDesign #ReproducibleResearch #Bioinformatics #Apptainer #DataGovernance #Netherlands

Galaxy instance for sensitive data running in isolated network environ

GDPR-compliant Galaxy clone in isolated environment

@gnulinux Danke für den podcast zu #Apptainer :) Gab mir als früher intensiver Nutzer von #hpc einen informativen Einblick, was aus Singularity entstanden ist, und zu den aktuellen Möglichkeiten mit containern und wissenschaftlichem Rechnen 

My head hurts. Doing a deep-dive into containerization/VM with #Jenkins. So many options. I think I'll give #LXD a shot. But frankly, since my #OpenMPI program is already containerized via #Apptainer, I'll just go ahead and build on the (fairly powerful) Jenkins host for now, just to get the pipeline built as a proof of concept.

Time for an adult beverage.

🎩✨ Behold, the marvel of Apptainer: the magical name change from #Singularity that will revolutionize your Linux container universe by... being exactly like every other container system but with more labels. 🌟🔒 Rejoice as your software components remain safely ensconced in their digital dungeons, as you navigate the labyrinthine #GitHub to inspect your secured, portable future. 🤖🔍
https://apptainer.org/ #Apptainer #LinuxContainers #SoftwareDevelopment #HackerNews #ngated
Apptainer - Portable, Reproducible Containers

Apptainer is an open source container platform designed to run complex applications on high-performance computing (HPC) clusters in a simple, portable, and reproducible way.

Apptainer - Portable, Reproducible Containers

Apptainer is an open source container platform designed to run complex applications on high-performance computing (HPC) clusters in a simple, portable, and reproducible way.

@beardedtechguy Doing some literature review for a grant application and trying to figure out how to do SCIF apps in #Apptainer. They're jackhammering the hell out of the pavement in front of my office, so I sought refuge in the student center's Starbucks.
#Python #poetry (and #uv I guess) is NOT a comprehensive tool to pin your environment! It is JUST a tool to help you manage some downstream Python packages, that's it. Use something more powerful like  #nix flakes or #apptainer​s or whatever floats your boat to do proper pinning of an environment - where you can pin your package manager itself.

@beardedtechguy Welcome back! And I guess congratulations are in order

Grading and accreditation work are done here, too, for now. I’m currently picking up my NASA work again, building an #Apptainer container to be shipped to Oxford University. Also getting ready to upgrade my #HamRadio license and working on improving my wireless communications class for next semester.

@cliffwade Morning, Cliff. We're getting a new roof as we speak. Hopefully will be done by 6pm tonight. I’ll be shipping some NASA code via #Apptainer to Oxford University after tracking down some bugs in both apptainer and the code itself. I'll spend the weekend studying up a bit to upgrade my #HamRadio license and thinking about how to improve my wireless communications class for next semester. There will be the occasional beer sprinkled in for relaxation.
Building an #Apptainer container for our colleagues in Oxford. The task is made much more pleasant by the awesome weather and a bottle of #Jever Pilsener. It’s very nice outside sitting on the deck.