~40% of XBB.1.16 & 29% of XBB.2.3* sequences submitted from USA were identified by Airport Surveillance [@ 7 international airports (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia)]
Dashboard without airport sequences
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RT @RajlabN
#COVID19 #VariantDashboard - #USA
[without "Airport Surveillance" sequences]
Top lineages (#15DayTrends):
XBB.1.5 (62.5%)
XBB.1.16 (3.4%)
XBB.1.9.1 (3.4%)
XBB.1.5.1 (2.6%)
…
https://twitter.com/RajlabN/status/1654324802763587584
Overall trends consistent with #VariantDashboard #15DayTrends - #USA
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RT @RajlabN
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (#15DAYTRENDS):
54.5% XBB.1.5
5.8% XBB.1.16
5.2% XBB.1.9.1
2.6% XBB.1.16.1
2.5% XBB.1.5.1
2.2% XBB.2.3
2.1% XBB.1.9.2
1.7% EG.1
#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/04/23
USA Airport surveillance update #15DayTrends
149 sequences from 6 US States (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia) from @CDCgov's Traveler-Based Genomic Surveillance Program.
*Includes pooled swabs & Many bad QC seqs
15/n
Status of the latest #COVID19 Wave in #Texas
XBB.1.5 is still the top circulating lineage in TX (#15DayTrends)
14/n
Status of the latest #COVID19 Wave in #California
XBB.1.5 is still the top circulating lineage in CA (#15DayTrends) includes airport surveillance sequences
13/n
Airport sequences constitute ~19.5% of sequences with sample collection dates in the last 15 days (#15DayTrends)
Its going to be a three way race to outcompete XBB.1.5*: XBB.1.9* vs XBB.1.16* vs XBB.2.3*
As of now, XBB.1.16* family looks to over take everything else!
3/n
#COVID19 #VariantDashboard - #USA
[without "Airport Surveillance" sequences]
Top lineages (#15DayTrends):
XBB.1.5 (62.5%)
XBB.1.16 (3.4%)
XBB.1.9.1 (3.4%)
XBB.1.5.1 (2.6%)
XBB.1.5.13 (1.6%)
XBB.2.3 (1.5%)
FL.2 (1.3%)
EG.1 (1.1%)
FU.1 (1.1%)
XBB.1.16.1 (1.1%)
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (#15DAYTRENDS):
54.5% XBB.1.5
5.8% XBB.1.16
5.2% XBB.1.9.1
2.6% XBB.1.16.1
2.5% XBB.1.5.1
2.2% XBB.2.3
2.1% XBB.1.9.2
1.7% EG.1
#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/04/23
1/n
USA Airport surveillance update #15DayTrends
193 sequences from 6 US States (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia) from @CDCgov's Traveler-Based Genomic Surveillance Program.
*Includes pooled swabs & Many bad QC seqs
15/n
Status of the latest #COVID19 Wave in #Texas
XBB.1.5 is still the top circulating lineage in TX (#15DayTrends)
14/n
Raj Rajnarayanan 
